
Ioannis G.
PhD Data Scientist Bioinformatics Biostatistics Expert
Habilidades

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Experiência profissional
PhD Fellow & Bioinformatics Researcher
Self Employed • Período integral
Aug 2021 - Present • 4 yrs 11 mos
Bioinformatics Pipeline Design: Develop and optimize reproducible data-processing pipelines for Next-Generation Sequencing (NGS) datasets, specifically focusing on 16S/ITS rRNA amplicon sequencing and complex metagenomic workflows. Computational Frameworks: Utilize command-line environments and specialized computational biology suites (including QIIME 2, VSEARCH, and GTDB-Tk) to manage taxonomic classification, alpha/beta diversity metrics, and community dynamics mapping. Biostatistics & Scripting: Write custom data-cleaning scripts, multivariate statistical models, and publication-quality figures using R (ggplot2), Python, and Linux Bash. Wet-Lab Methodologies: Manage anaerobic culturing setups, specialized sediment processing, and molecular biology workflows for novel strain characterization in extreme anoxic and organic-rich environments. Scientific Dissemination: Author, format, and edit technical manuscripts for premier international peer-reviewed journals (such as MDPI and BMC platforms), successfully managing complex reviewer feedback and compliance requirements.