l
lingunja

lingunja

@lingunja

Bioinfomatics Pipeline Developer

Zâmbia
Inglês
Algumas informações são exibidas no idioma inglês.
Sobre mim
I build reproducible bioinformatics pipelines for NGS data analysis, specializing in RNA-seq differential expression and cancer genomics. Recent project: RNA-seq pipeline on NCBI breast cancer dataset PRJNA432903. Identified 2298 significant DEGs, 86% variance by PC1. Tools: HISAT2, DESeq2, R, Python, Bash, Git, Linux. I deliver clean pipelines, publication-ready figures, and reproducible results.... Saiba mais

Habilidades

l
lingunja
lingunja
offline • 

Conheça meus serviços

Machine learning
I will perform rnaseq differential expression analysis on your dataset
A partir deUS$ 90 /projetoMais detalhes
Machine learning
I will perform single cell rna seq analysis and cell type annotation
A partir deUS$ 150 /projetoMais detalhes

Experiência profissional

Self_Level

Bioinformatics Pipeline Developer

Self Level • Freelance

Jan 2025 - Present • 1 yr 4 mos

Developed an end-to-end RNA-seq differential expression pipeline analyzing breast cancer genomics data from NCBI dataset PRJNA432903. Pipeline includes HISAT2 alignment to GRCh38 reference genome, featureCounts quantification, and DESeq2 statistical analysis. Identified 2298 significant DEGs with PC1 explaining 86% of variance. Delivered volcano plot, heatmap, and full HTML report. Tools: R, Python, Bash, Git, Linux, DESeq2, HISAT2