I will perform molecular docking, MD simulation, and admet analysis

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Índia

Eu falo Hindi, Inglês

molecular docking, MD simulation, drug discovery, GROMACS, AutoDock Vina, ADMET,

molecular docking, MD simulation, drug discovery, GROMACS, AutoDock Vina, ADMET, computational chemistry, bioinformatics, virtual screening, homology modeling
Sobre este Serviço

Hi there,


I'm a researcher specializing in bioinformatics and computational chemistry. If you need molecular docking, molecular dynamics (MD) simulations, or ADMET profiling for your research project, thesis, or paper, I can help you set it up and run it.


I run simulations using high-performance cloud GPUs (mainly GROMACS and AutoDock Vina) to deliver fast and accurate results.


What I can help with:

Molecular Docking: Protein-ligand docking (AutoDock Vina, PyRx), site-specific or blind docking, virtual screening, and pose visualization (PyMOL/Discovery Studio).

MD Simulations: System setup, equilibration, and production runs (10ns to 100ns+) in GROMACS or NAMD. I'll analyze RMSD, RMSF, Rg, SASA, hydrogen bonds, and MM-PBSA binding energy.

ADMET & Drug-likeness: SwissADME/pkCSM profiling and Lipinski's Rule of Five filters.

Homology Modeling: 3D protein structure modeling (SWISS-MODEL/Modeller) and validation.


What you'll receive:

A clean, professional results report with publication-ready figures.

All raw output files (.pdbqt, .gro, .xtc, .xvg, etc.) for your records.

A written methodology section that you can easily format for your paper or thesis.

Domínio:

Deep learning

Outros

Especialidade:

processamento de imagem

Classificação

agrupamento

Linguagem de programação:

Python

R

SQL

JAVA

Amazon SageMaker

Ferramentas:

caderno Jupyter

opencv

OpenNN

Excel

MLflow

Tecnologia:

Python

JAVA

R

PyTorch

OpenNN

SQL

Modelos e métodos:

Machine learning

Deep learning

Redes neurais

Meu portfólio